- Satellite Office at Chulalongkorn University (GSS)
- Global Center of Excellence Kyoto University – Institut Teknologi Bandung for GCOE Joint Research and Education Center (GSEng.)
- Kyoto University-University of Malaya Overseas Base in Malaysia for Education and Research (GSEng.)
- Japanese Research-Team Laboratory, Kinabalu Park Headquarters (GSA)
- Khon Kaen Reseach Office of the Graduate School of Agriculture, Kyoto University (GSA)
- Japanese Research-Team Laboratory, Deramakot Forest Reserve (GSA)
- Kyoto University Research Office at Kasetsart University (GSA)
- JASTIP Bioresource & Biodiversity Joint Laboratory (GSA)
- Kyoto University Satellite Office at IPB University (formerly Bogor Agricultural University) (GSA/GSGES)
- Laos Field Station (ASAFAS/CSEAS)
- Makassar Field Station (ASAFAS/CSEAS)
- Myanmar Field Station (ASAFAS/CSEAS)
- Cambodia Field Station (ASAFAS/CSEAS)
- Pekanbaru Field station (ASAFAS/CSEAS)
- Hue Kyoto University GSGES Office (GSGES)
- Danang Kyoto University GSGES Office (GSGES/GSEng.)
- Hanoi Kyoto University GSGES Office (GSGES)
- Mahidol Kyoto University GSGES Office (GSGES)
- Thai Research Station Collaborative Research Laboratory (IAD)
- JASTIP Energy & Environment Joint Laboratory @ Pathum Thani (IAD)
- JASTIP Energy & Environment Joint Laboratory @ Bangkok (IAD)
- Equatorial Atmosphere Radar (RISH)
- RISH-RDUB Satellite Office (RISH)
- MHP Acacia Research Office (RISH)
- ARN Joint Laboratory / JASTIP Bioresources & Biodiversity Joint Laboratory (RISH)
- JASTIP Disaster Prevention Joint Laboratory (DPRI)
- JASTIP Disaster Prevention Joint Laboratory (DPRI)
- Bangkok Liaison Office (CSEAS)
- Jakarta Liaison Office (CSEAS)
- JASTIP Headquarters (CSEAS)
- Field Station for Tropical Forest and Biodiversity Studies (CER)
- Kuala Sungai Danum Research Station (WRC)
- Smart Materials Research Center (KUIAS)
- Laboratory for Green Porous Material (KUIAS)
As of March 1, 2021
GSEng.: Graduate School of Engineering, GSS: Graduate School of Science, GSA: Graduate School of Agriculture, ASAFAS: Graduate School of Asian and African Area Studies, CSEAS: The Center for Southeast Asian Studies, GSGES: Graduate School of Global Environmental Studies, IAD:Institute of Advanced Energy, RISH: The Research Institute for Sustainable Humanosphere, DPRI:Disaster Prevention Research Institute, CER:Center for Ecological Research, WRC: The Wildlife Research Center, KUIAS:Institute for Advanced Study